ProServer
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Revision as of 02:02, March 15, 2009 by Dan Bolser (Talk | contribs)
A list of the column names allowed in the data structure that is returned by the build_features method:
| field | value |
|---|---|
| segment | segment ID |
| id | feature ID |
| feature_id | feature ID |
| label | feature text label |
| feature_label | feature text label |
| start | feature start position |
| end | feature end position |
| ori | feature strand |
| phase | feature phase |
| type | feature type ID |
| typetxt | feature type text label |
| typecategory | feature type category |
| type_category | feature type category |
| typesubparts | feature has subparts |
| typesuperparts | feature has superparts |
| typereference | feature is reference |
| method | annotation method ID |
| method_label | annotation method text label |
| score | annotation score |
| note | feature text note(s) |
##########################################################################
# For one or more links:
link => $ or [$,$,$...] # feature link href
linktxt => $ or [$,$,$...] # feature link label
# For hash-based links:
link => {
$ => $, # href => label
...
}
###############################################################################
# For a single target:
target_id => $ # target ID
target_start => $ # target start position
target_stop => $ # target end position
targettxt => $ # target text label
# For multiple targets:
target => scalar or [{
id => $,
start => $,
stop => $,
targettxt => $,
},{}...]
###############################################################################
# For a single group:
group_id => $ # feature group ID
grouplabel => $ # feature group text label
grouptype => $ # feature group type ID
groupnote => $ # feature group text note
grouplink => $ # feature group ID
grouplinktxt => $ # feature group ID
# For multiple groups:
group => [{
grouplabel => $
grouptype => $
groupnote => $
grouplink => $
grouplinktxt => $
note => $ or [$,$,$...]
target => [{
id => $
start => $
stop => $
targettxt => $
}],
}, {}...]
